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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621609 chr22:33347552 A/G LOC646851 chr22:38974125-39052634:- 0.41 6.34 5.17E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G LZTR1 chr22:21333751-21353327:+ 0.71 9.23 8.88E-19 Box Plot
THCA rs9621609 chr22:33347552 A/G MAPK1 chr22:22108789-22221970:- 0.56 9.4 2.22E-19 Box Plot
THCA rs9621609 chr22:33347552 A/G MCAT chr22:43528212-43539400:- 0.53 8.16 2.98E-15 Box Plot
THCA rs9621609 chr22:33347552 A/G MEAF6 chr1:37958176-37980375:- -0.32 -5.97 4.54E-9 Box Plot
THCA rs9621609 chr22:33347552 A/G MED15 chr22:20850200-20941919:+ 0.38 6.38 4.27E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G MICALL1 chr22:38301664-38338829:+ 0.49 6.62 9.91E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G MKL1 chr22:40806285-41032706:- 0.63 8.36 6.89E-16 Box Plot
THCA rs9621609 chr22:33347552 A/G MPST chr22:37415676-37425863:+ 0.54 7.81 3.59E-14 Box Plot
THCA rs9621609 chr22:33347552 A/G MRPL40 chr22:19419425-19423598:+ 0.54 7.53 2.5E-13 Box Plot
THCA rs9621609 chr22:33347552 A/G MTMR3 chr22:30279144-30426855:+ 0.61 8.21 2.01E-15 Box Plot
THCA rs9621609 chr22:33347552 A/G MTP18 chr22:30805176-30825041:+ 0.52 6.67 7.15E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G NCAPH2 chr22:50946645-50961901:+ 0.62 8.14 3.39E-15 Box Plot
THCA rs9621609 chr22:33347552 A/G NDUFA6 chr22:42481529-42486959:- 0.57 8.02 8.17E-15 Box Plot
THCA rs9621609 chr22:33347552 A/G NF2 chr22:29999545-30094587:+ 0.61 7.4 6.15E-13 Box Plot